CDS

Accession Number TCMCG073C06624
gbkey CDS
Protein Id XP_010530004.1
Location complement(join(2616354..2616482,2616736..2616855,2616935..2617066,2617324..2617395,2617515..2617562,2617654..2618006,2618084..2618177,2618275..2618349,2618552..2618686,2618836..2618913,2618987..2619085,2619170..2619283,2619432..2619587,2619774..2619902,2619979..2620050,2620122..2620264,2620438..2620504,2620604..2620675,2620828..2620899,2620978..2621100,2621222..2621330,2621434..2621552,2621636..2621686,2621811..2621906,2621980..2622072,2622206..2622256,2622389..2622559,2622643..2622894,2623190..2623729))
Gene LOC104806689
GeneID 104806689
Organism Tarenaya hassleriana

Protein

Length 1254aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010531702.1
Definition PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category A
Description Regulator of nonsense transcripts 1 homolog
KEGG_TC -
KEGG_Module M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14326        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000932        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009751        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009756        [VIEW IN EMBL-EBI]
GO:0009863        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010182        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035690        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048571        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071236        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071446        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCTCAACAGAACAACCTCTTCGAGACGGCGTCGCAGCCCGACACAGCCGCCGACGCATACACCTTTTTGGAATTCAATACCCAGGGCGAGTCTGAGTTCGACTACCCTGAGTTCCGATCACCGGCAGCGTGGCCCACGCCCTCTGATTCCCTCTCCATCCCTGACCCATCCGATCGCGGAGGTGCCGCCGGAGATCACCACTCCGAGGCTTCGTCGCCTTCCCCGTTGTCTTCGCCGGCTCCTGGAAGTAGCTCCAAGGGGGGACGCGGTGGAGTTGGAGGAGGCGGTGGTGGTGGTGGTAGTAGTAGCAGTCAGGTTGATGCATTGGCGGCTGGGATGGGGAATTTGAACTTCGAGGAGACCGGGGATGACGACGCTTTTGATTATGGAAAAGGGGATTTCACAGAGCACGCATGCAAGTATTGTGGTATCTCGAATCCGGCTTGCGTTGTGAGGTGCAATGTTGCGTCTTGTCGGAAGTGGTTCTGCAATTCGAGGGGAAATACCTCGGGCTCTCATATTGTCAATCATTTGGTTCGAGCAAAACACAAGGAAGTTTGTCTCCATAAGGACAGCCCTCTCGGGGAAACAATTCTTGAGTGCTACAACTGTGGGTGTCGAAATGTCTTCCTCCTCGGATTCATTTCAGCAAAAACAGAGAGTGTTGTTGTCCTTCTTTGTAGAGAACCTTGTCTAAATGTAAATGCCCTGAAGGACATGAACTGGGATCTAAGTCAGTGGTGTCCTCTGATCGATGATAGGTGTTTCCTACCGTGGCTTGTTAAGGTTCCATCTGAACAAGAACAGTTGAGGGCACGTCAAATTAGTGCACAACAAATAAACAAGATAGAGGAATTATGGAAGACTAATCCTGATGCTACACTTGAAGATCTTGAAAAACCTGGTGTTGATGATGAACCTCAGTCTGTTCAATTGAAGTATGAAGATGCATATCAGTATCAAAATGTGTTCGCACCTCTTATCAAGCTTGAAGCAGATTATGACAAAATGATGAAAGAGTCTCAAAGCAAGGATAATGTCACAGTTCGCTGGGATATTGGTCTTAACAAGAAGCGTATTGCATATTTCGTCTTCCCAAAGGAGGACAATGAATTGCGTTTAGTGCCAGGTGATGAACTCCGACTGCGTTATTCTGGAGATGCAGCGCATCCAGCATGGCAGTCAGTTGGACATGTGATCAAGCTAACTGCACAAGAAGAGGTTGCTCTTGAACTCCGTGTCAATCAGGGGGTTCCTATTGATGTGAACCATGGGTTTAGTGTTGATTTCGTATGGAAGAGTACGAGCTTTGACCGGATGCAGGGAGCAATGAAGACTTTTGCTGTAGATGAAACAAGTGTGAGTGGGTATATTTACCACCACTTATTGGGACATGAAGTTGAGGCTCAGATGGTGCGTAACACACTACCTCGTCGTTTTGGAGCACCTGGTCTACCGGAACTGAATGCATCTCAGGTTTTTGCAGTGAAGAGTGTCCTTCAAAAGCCTATTAGTCTAATTCAAGGTCCTCCTGGGACTGGTAAAACTGTGACTTCTGCGGCGATTGTTTATCACATGGCCAAACAGGGCCAGGGACAAGTTCTCGTTTGTGCCCCCAGTAATGTTGCCGTAGACCAACTAGCTGAAAAGATAAGTGCTACTGGTTTGAAGGTTGTTCGACTGTGTGCAAAATCAAGGGAAGCTGTAAGTTCTCCTGTTGAGCATTTGACCCTTCACTACCAGGTTAGGCATCTTGACACATCTGAGAAGAGTGAACTCCATAAGCTGCAGCAGTTGAAAGATGAACAAGGTGAACTGTCAAGCAGTGATGAAAAGAAATACAAAGCACTTAAACGAGCTACAGAACGCGAGATAACCCAAAGTGCTGATGTCATATGCTGCACTTGTGTTGGTGCGGGGGATCCACGGTTGGCAAATTTTAGATTTCGACAGGTACTTATTGACGAGTCTACTCAAGCAACAGAACCTGAGTGTTTTATCCCTCTGGTCCTTGGAGCAAAACAGGCTGTTCTTGTTGGCGATCATTGCCAACTTGGTCCTGTCATTATGTGCAAGAAAGCGGCCCGTGCTGGCTTGGCACAATCTCTTTTTGAACGCCTGGTGCTGCTTGGTGTTAAGCCAATTAGGTTACAGGTTCAATACCGTATGCACCCAGCTTTGTCTGAGTTTCCTTCCAACAGTTTTTATGAAGGCACTCTCCAGAATGGAGTCACGATTAATGAAAGGCAAACATCGGGGATTGACTTTCCCTGGCCTGTGCCTAATCGTCCCATGTTTTTCTATGTCCAGTTGGGACAAGAGGAGATCAGTGCTAGTGGAACTTCGTATTTGAATCGAACTGAGGCCGCTAACGTTGAGAAGATTGTGACCACTTTCTTAAAGAGTGGAGTAGTTCCTGGCCAGATTGGAGTGATAACCCCATACGAGGGACAGAGGGCATATATTGTAAATTACATGTCGAGAAATGGTGCTCTCAGACAACAACTTTACAAGGAAATTGAGGTCGCTAGTGTTGATTCTTTTCAAGGAAGGGAAAAAGATTACATCATATTGTCCTGTGTGAGAAGCAACGAGCATCAGGGCATTGGATTTCTTAATGATCCTAGGAGGCTCAATGTTGCTCTTACCCGTGCTCGTTATGGGATTGTTATTCTTGGAAACCCTAAGGTTCTCAGTAAACAGCCTCTGTGGAATGGCTTGCTGACGCATTACAAGGAACATGAGTGCTTGGTCGAGGGGCCTCTGAATAATTTAAAGCAAAGCATGGTACAATTTCAGAAACCAAGAAAGATTTACAATGACCGGAGGCTGTTTTATGGTGGTGGGGCTGGAATTATGGGAAACGAAAACTCTACTGCTGATAGGAGAGGTGGTCGTGGAAGGGCTGTTGGCTCTTATCTGCCTCCTGGCCCTCTCAATGGCGCTAGACCTGGACTCCATCCAGCTGGATATCCAATGCCTAGGGTACCACTTCAACCCTTTCCTGGTGGTCCTCCTTCTCAGCCATATGCCATTCCAGCTCGTGGGCCTGTAGGTGCTGTTCCTCATGTTCCCCAACCTGGAAATCACGGTTTTGGTAGTGGACGTGGAAATCCAATCGGCGGCCACCTTCCCCACCAACAAGCGACTCAGCAAAATGTTGGGACTATTGGTCCTAGTTTTAACTTTCCCCTGGAGAGTCCAAGTAGCCAGCCTTCTGCGGGTGGTCCGCTATCTCAACCTGGATATGTAAATAATGGAAGTCAGACCTTCAGAGATGGATTTTCTATGGGTGGCATATCGCAGGATTTCTTGGGTGATGACTTTAAGAGCCAGGGATCTCATGTTCCTTACAATGTGGCTGACTTTTCTACTCAGGCCTCACAGAGTGGATATGCTGTTGATTATGCCACACAAGGAGCCCATGGGGCATTTTCTGGGAACTTCCTAAACCAGAATTCTCAAGTGGGTTATTCTCGTTTTGGTGGAGGAAATGATTTCATGTCCCAGGAGTACATGGCACATGGGTCACAAGGTCTTTTTACCCAGGCTGGCTTTACCGATCCCTCACAAGACGATGGCCAGAAGAATCAATATGGTGTGAACAACCCTAGCCATCTTCAGGCTCAGGGTCTGCCAAATTCACTCTATTCGCAGCCTTTCTCACACTACAACACACAGCCACTGAACTTGTCCAACCCCCAGCAGTCTCAACCTGGCCAGGGCTCTCAGAACCCGAAACTTCCCTACAATGGCTGA
Protein:  
MDSQQNNLFETASQPDTAADAYTFLEFNTQGESEFDYPEFRSPAAWPTPSDSLSIPDPSDRGGAAGDHHSEASSPSPLSSPAPGSSSKGGRGGVGGGGGGGGSSSSQVDALAAGMGNLNFEETGDDDAFDYGKGDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDLEKPGVDDEPQSVQLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRVNQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEAQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREITQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECFIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQTSGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPGQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRLFYGGGAGIMGNENSTADRRGGRGRAVGSYLPPGPLNGARPGLHPAGYPMPRVPLQPFPGGPPSQPYAIPARGPVGAVPHVPQPGNHGFGSGRGNPIGGHLPHQQATQQNVGTIGPSFNFPLESPSSQPSAGGPLSQPGYVNNGSQTFRDGFSMGGISQDFLGDDFKSQGSHVPYNVADFSTQASQSGYAVDYATQGAHGAFSGNFLNQNSQVGYSRFGGGNDFMSQEYMAHGSQGLFTQAGFTDPSQDDGQKNQYGVNNPSHLQAQGLPNSLYSQPFSHYNTQPLNLSNPQQSQPGQGSQNPKLPYNG